Links : Nucleotide Sequence Databases
Nucleotide Sequence Databases
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BSR The Biological Structure Resource, Rutgers University)
[Offers and distributes structural information about nucleic acids, maintaining the macromolecular Crystallographic Information File for macromolecular structures]
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Codon Usage Database
[Codon Usage Tabulated from GenBank: The frequency of codon use in each organism is made searchable through this site]
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Collection of human genome databases
[Informations about Specific sites, Organizations (root page) and available Data]
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DDBJ - DNA Data Bank of Japan
[The sole DNA data bank in Japan, provides worldwide many tools for retrieval and analysis]
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EMBL - Nucleotide Sequence Database (EBI)
[Research and services in bioinformatics: databases of biological data including nucleic acid, protein sequences and macromolecular structures]
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Frame - ProfileScan Server
[Querys the collection of prosite profiles with a single DNA sequence. The six reading frames of the DNA query are inspected.]
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Genbank (NCBI)
[Molecular biology information, e.g. public databases, research in computational biology, software tools for analyzing genome data...]
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GenoList genome browser
[Links to GenoList Browsers of various organisms]
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Genome Sequencing Center
[Focus on large scale generation, analysis of DNA sequence, constructing clone map & contributing 25% of the finished sequence in The Human Genome Project]
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Molecular Biological Software
[Provides a RepeatFinder, a tool to create Gels, an Enhancer Finder, a Splice Site Finder, a Splice Site Score calculator,...]
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Multiple Sequence Alignment
[Computes a multiple global alignment of sequences; good at producing an alignment where there are long terminal or internal gaps in some sequences]
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NCBI BLAST Databases
[Provides information about Nucleotide, Protein, Translated, Genomes, Special and Meta]
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NCBI Databases
[Search and retrieval system for major databases, including PubMed, Nucleotide and Protein Sequences, Protein Structures, Complete Genomes and others]
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Nucleotide Variation and Mutation Database
[Entries for thousands of genes which present known variations in the context of the genomic sequence for the gene, also including PCR and DHPLC protocols]
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Online Tools and Protocols
[Information about IterAlign (protein multiple alignment)@Stanford University, BCM Launchers@BCM: web-based software, EBI Web-bases service@EBI...]
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Single Nucleotide Polymorphism
[A tool to search in SNP Databases]
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Single Nucleotide Polymorphism
[Gene Model (mRNA alignment) information from genome sequence]
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SMART - Simple Modular Architecture Research Tool
[Allows the identification and annotation of more than 500 genetically mobile domain families and the analysis of domain architectures]
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Splice Site Score Calculator
[An algorithm to calculate the scores of donor and acceptor sequences as well as an algorithm to calculate the score of branch sequence]
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The RNA World
[Databases of sequences, secondary structures, coordinates and images of three-dimensional structures to other web tools, software, books, tutorials and meetings]